TaxMan results

TaxMan provides downloads of the "PCR" products (amplicons) of your primers in FASTA format as well as an overview of related taxa. You can also interactively browse the sequence-oriented taxonomic tree of your amplicons and look at the coverage by plotting pie charts below. For more information, see the documentation page.

The CORE (20120209) database you selected contains 1159 non-redundant sequences. Based on your primers (none removed), 898 amplicons have been produced of which 728 are non-redundant and 170 (18.9%) are identical. Thus, your primers target 77.5% of all database sequences (or 62.8% based on the non-redundant amplicons). For a breakdown, see the tree below.

Download amplicon and lineage data

Taxonomic tree with sequence-based counts

Bacteria: 728 / 1159 (62.8%)

Acidobacteria: 1 / 1 (100.0%)

Acidobacteriales: 1 / 1 (100.0%)

Acidobacteriaceae: 1 / 1 (100.0%)

Acidobacterium: 1 / 1 (100.0%)

Phylum Acidobacteria: 1 / 1 (100.0%)

Actinobacteria: 73 / 119 (61.3%)

Actinobacteridae: 64 / 110 (58.2%)

Actinomycetales: 56 / 102 (54.9%)

Actinomycetaceae: 36 / 64 (56.2%)

Actinobaculum: 2 / 4 (50.0%)

Actinobaculum 12B759: 1 / 1 (100.0%)

Actinobaculum oral taxon 848: 1 / 1 (100.0%)

Actinobaculum oral taxon 848_2: 0 / 1 (0.0%)

Actinobaculum oral taxon D50: 0 / 1 (0.0%)

Actinomyces: 34 / 60 (56.7%)

Actinomyces 3RH-48: 0 / 1 (0.0%)

Actinomyces cardiffensis: 1 / 1 (100.0%)

Actinomyces cardiffensis_2: 0 / 1 (0.0%)

Actinomyces dentalis: 1 / 1 (100.0%)

Actinomyces dentalis_2: 1 / 1 (100.0%)

Actinomyces dentalis_3: 1 / 1 (100.0%)

Actinomyces georgiae: 1 / 1 (100.0%)

Actinomyces georgiae_2: 1 / 1 (100.0%)

Actinomyces gerencseriae: 1 / 1 (100.0%)

Actinomyces gerencseriae_2: 1 / 1 (100.0%)

Actinomyces gerencseriae_3: 0 / 1 (0.0%)

Actinomyces gerencseriae_4: 0 / 1 (0.0%)

Actinomyces graevenitzii: 1 / 1 (100.0%)

Actinomyces IP073: 1 / 1 (100.0%)

Actinomyces IP073_2: 0 / 1 (0.0%)

Actinomyces israelii: 1 / 1 (100.0%)

Actinomyces johnsonii: 1 / 1 (100.0%)

Actinomyces massiliensis: 1 / 1 (100.0%)

Actinomyces massiliensis_2: 1 / 1 (100.0%)

Actinomyces meyeri: 1 / 1 (100.0%)

Actinomyces nbu116h11c1: 1 / 1 (100.0%)

Actinomyces nbw727g03c1: 1 / 1 (100.0%)

Actinomyces odontolyticus lingnae: 1 / 1 (100.0%)

Actinomyces odontolyticus lingnae_2: 1 / 1 (100.0%)

Actinomyces odontolyticus lingnae_3: 1 / 1 (100.0%)

Actinomyces odontolyticus lingnae_4: 0 / 1 (0.0%)

Actinomyces odontolyticus lingnae_5: 0 / 1 (0.0%)

Actinomyces oricola: 1 / 1 (100.0%)

Actinomyces viscosus naeslundii oris: 1 / 1 (100.0%)

Actinomyces viscosus naeslundii oris_2: 1 / 1 (100.0%)

Actinomyces viscosus naeslundii oris_3: 1 / 1 (100.0%)

Actinomyces viscosus naeslundii oris_4: 1 / 1 (100.0%)

Actinomyces viscosus naeslundii oris_5: 1 / 1 (100.0%)

Actinomyces viscosus naeslundii oris_6: 1 / 1 (100.0%)

Actinomyces viscosus naeslundii oris_7: 1 / 1 (100.0%)

Actinomyces viscosus naeslundii oris_8: 1 / 1 (100.0%)

Actinomyces viscosus naeslundii oris_9: 1 / 1 (100.0%)

Actinomyces viscosus naeslundii oris_10: 1 / 1 (100.0%)

Actinomyces viscosus naeslundii oris_11: 1 / 1 (100.0%)

Actinomyces viscosus naeslundii oris_12: 1 / 1 (100.0%)

Actinomyces viscosus naeslundii oris_13: 1 / 1 (100.0%)

Actinomyces viscosus naeslundii oris_14: 0 / 1 (0.0%)

Actinomyces viscosus naeslundii oris_15: 0 / 1 (0.0%)

Actinomyces viscosus naeslundii oris_16: 0 / 1 (0.0%)

Actinomyces viscosus naeslundii oris_17: 0 / 1 (0.0%)

Actinomyces viscosus naeslundii oris_18: 0 / 1 (0.0%)

Actinomyces viscosus naeslundii oris_19: 0 / 1 (0.0%)

Actinomyces viscosus naeslundii oris_20: 0 / 1 (0.0%)

Actinomyces viscosus naeslundii oris_21: 0 / 1 (0.0%)

Actinomyces viscosus naeslundii oris_22: 0 / 1 (0.0%)

Actinomyces viscosus naeslundii oris_23: 0 / 1 (0.0%)

Actinomyces viscosus naeslundii oris_24: 0 / 1 (0.0%)

Actinomyces viscosus naeslundii oris_25: 0 / 1 (0.0%)

Actinomyces viscosus naeslundii oris_26: 0 / 1 (0.0%)

Actinomyces viscosus naeslundii oris_27: 0 / 1 (0.0%)

Actinomyces viscosus naeslundii oris_28: 0 / 1 (0.0%)

Actinomyces viscosus naeslundii oris_29: 0 / 1 (0.0%)

Actinomyces viscosus naeslundii oris_30: 0 / 1 (0.0%)

Actinomyces viscosus naeslundii oris_31: 0 / 1 (0.0%)

Actinomyces viscosus naeslundii oris_32: 0 / 1 (0.0%)

Corynebacteriaceae: 12 / 18 (66.7%)

Corynebacterium: 12 / 18 (66.7%)

Corynebacterium argentoratense: 1 / 1 (100.0%)

Corynebacterium durum: 1 / 1 (100.0%)

Corynebacterium durum_2: 1 / 1 (100.0%)

Corynebacterium durum_3: 1 / 1 (100.0%)

Corynebacterium durum_4: 0 / 1 (0.0%)

Corynebacterium matruchotii: 1 / 1 (100.0%)

Corynebacterium matruchotii_2: 1 / 1 (100.0%)

Corynebacterium matruchotii_3: 1 / 1 (100.0%)

Corynebacterium matruchotii_4: 1 / 1 (100.0%)

Corynebacterium matruchotii_5: 0 / 1 (0.0%)

Corynebacterium matruchotii_6: 0 / 1 (0.0%)

Corynebacterium matruchotii_7: 0 / 1 (0.0%)

Corynebacterium matruchotii_8: 0 / 1 (0.0%)

Corynebacterium matruchotii_9: 0 / 1 (0.0%)

Corynebacterium propinquum pseudodiphtheriticum: 1 / 1 (100.0%)

Corynebacterium propinquum pseudodiphtheriticum_2: 1 / 1 (100.0%)

Corynebacterium striatum: 1 / 1 (100.0%)

Corynebacterium tuberculostearicum: 1 / 1 (100.0%)

Dermabacteraceae: 1 / 1 (100.0%)

Brachybacterium: 1 / 1 (100.0%)

Brachybacterium rhamnosum: 1 / 1 (100.0%)

Dermacoccaceae: 1 / 1 (100.0%)

Dermacoccus: 1 / 1 (100.0%)

Dermacoccus nishinomiyaensis: 1 / 1 (100.0%)

Microbacteriaceae: 1 / 4 (25.0%)

Microbacterium: 0 / 3 (0.0%)

Rathayibacter: 1 / 1 (100.0%)

Rathayibacter nbt108d11: 1 / 1 (100.0%)

Micrococcaceae: 5 / 9 (55.6%)

Arthrobacter: 1 / 1 (100.0%)

Arthrobacter woluwensis: 1 / 1 (100.0%)

Micrococcus: 0 / 1 (0.0%)

Micrococcus : 0 / 1 (0.0%)

Rothia: 4 / 6 (66.7%)

Rothia aeria: 1 / 1 (100.0%)

Rothia aeria_2: 0 / 1 (0.0%)

Rothia dentocariosa: 1 / 1 (100.0%)

Rothia dentocariosa_2: 1 / 1 (100.0%)

Rothia mucilaginosa: 1 / 1 (100.0%)

Rothia mucilaginosa_2: 0 / 1 (0.0%)

Propionibacteriaceae: 0 / 5 (0.0%)

Actinomycetales : 1 / 1 (100.0%)

Dermabacteraceae: 1 / 1 (100.0%)

Brachybacterium: 1 / 1 (100.0%)

Brachybacterium nbw192h11c1: 1 / 1 (100.0%)

Bifidobacteriales: 7 / 7 (100.0%)

Bifidobacteriaceae: 7 / 7 (100.0%)

Bifidobacterium: 3 / 3 (100.0%)

Bifidobacterium dentium: 1 / 1 (100.0%)

Bifidobacterium longum: 1 / 1 (100.0%)

Bifidobacterium scardovii: 1 / 1 (100.0%)

Parascardovia: 1 / 1 (100.0%)

Parascardovia denticolens: 1 / 1 (100.0%)

Scardovia: 3 / 3 (100.0%)

Alloscardovia omnicolens: 1 / 1 (100.0%)

Scardovia inopinata: 1 / 1 (100.0%)

Scardovia wiggsiae: 1 / 1 (100.0%)

Coriobacteridae: 9 / 9 (100.0%)

Coriobacteriales: 9 / 9 (100.0%)

Coriobacteriaceae: 9 / 9 (100.0%)

Atopobium: 2 / 2 (100.0%)

Atopobium parvulum: 1 / 1 (100.0%)

Atopobium rimae: 1 / 1 (100.0%)

Cryptobacterium: 1 / 1 (100.0%)

Cryptobacterium curtum: 1 / 1 (100.0%)

Olsenella: 5 / 5 (100.0%)

Olsenella C1: 1 / 1 (100.0%)

Olsenella F0004: 1 / 1 (100.0%)

Olsenella profusa: 1 / 1 (100.0%)

Olsenella profusa_2: 1 / 1 (100.0%)

Olsenella uli: 1 / 1 (100.0%)

Slackia: 1 / 1 (100.0%)

Slackia exigua: 1 / 1 (100.0%)

Aquificae: 1 / 1 (100.0%)

Aquificales: 1 / 1 (100.0%)

Aquificaceae: 1 / 1 (100.0%)

Aquifex: 1 / 1 (100.0%)

Phylum Aquificae: 1 / 1 (100.0%)

Bacteroidetes: 146 / 190 (76.8%)

Bacteroidia: 109 / 141 (77.3%)

Bacteroidales: 109 / 141 (77.3%)

Bacteroidaceae: 2 / 2 (100.0%)

Bacteroides: 2 / 2 (100.0%)

Bacteroides heparinolyticus: 1 / 1 (100.0%)

Bacteroides vulgatus: 1 / 1 (100.0%)

Porphyromonadaceae: 28 / 34 (82.4%)

Odoribacter: 1 / 1 (100.0%)

Odoribacter denticanis: 1 / 1 (100.0%)

Porphyromonas: 20 / 25 (80.0%)

ambiguous: 1 / 0

(Porphyromonas CW034/Porphyromonas catoniae): 1 / 0 (--%)

Porphyromonas catoniae: 1 / 1 (100.0%)

Porphyromonas catoniae_2: 1 / 1 (100.0%)

Porphyromonas catoniae_3: 1 / 1 (100.0%)

Porphyromonas catoniae_4: 1 / 1 (100.0%)

Porphyromonas catoniae_5: 1 / 1 (100.0%)

Porphyromonas catoniae_6: 1 / 1 (100.0%)

Porphyromonas catoniae_7: 1 / 1 (100.0%)

Porphyromonas catoniae_8: 1 / 1 (100.0%)

Porphyromonas catoniae_9: 1 / 1 (100.0%)

Porphyromonas catoniae_10: 1 / 1 (100.0%)

Porphyromonas catoniae_11: 0 / 1 (0.0%)

Porphyromonas catoniae_12: 0 / 1 (0.0%)

Porphyromonas CW034: 1 / 1 (100.0%)

Porphyromonas CW034_2: 1 / 1 (100.0%)

Porphyromonas CW034_3: 1 / 1 (100.0%)

Porphyromonas CW034_4: 0 / 1 (0.0%)

Porphyromonas endodontalis: 1 / 1 (100.0%)

Porphyromonas endodontalis_2: 1 / 1 (100.0%)

Porphyromonas endodontalis_3: 0 / 1 (0.0%)

Porphyromonas gingivalis: 1 / 1 (100.0%)

Porphyromonas gingivalis_2: 1 / 1 (100.0%)

Porphyromonas gingivalis_3: 1 / 1 (100.0%)

Porphyromonas gingivalis_4: 0 / 1 (0.0%)

Porphyromonas gingivalis_5: 0 / 1 (0.0%)

Porphyromonas HF001: 1 / 1 (100.0%)

Tannerella: 7 / 8 (87.5%)

Tannerella BU063: 1 / 1 (100.0%)

Tannerella BU063_2: 1 / 1 (100.0%)

Tannerella BU063_3: 1 / 1 (100.0%)

Tannerella forsythia: 1 / 1 (100.0%)

Tannerella forsythia_2: 1 / 1 (100.0%)

Tannerella forsythia_3: 0 / 1 (0.0%)

Tannerella oral taxon 808: 1 / 1 (100.0%)

Tannerella oral taxon 808_2: 1 / 1 (100.0%)

Prevotellaceae: 69 / 89 (77.5%)

Phocaeicola: 1 / 1 (100.0%)

Phocaeicola abscessus: 1 / 1 (100.0%)

Prevotella: 68 / 88 (77.3%)

ambiguous: 3 / 0

(Prevotella BR014/Prevotella oral taxon 292): 1 / 0 (--%)

(Prevotella histicola/Prevotella melaninogenica/Prevotella veroralis): 1 / 0 (--%)

(Prevotella oral taxon 306/Prevotella veroralis): 1 / 0 (--%)

Prevotella 10B515: 1 / 1 (100.0%)

Prevotella 301G11: 1 / 1 (100.0%)

Prevotella 301H01: 1 / 1 (100.0%)

Prevotella 303A09: 1 / 1 (100.0%)

Prevotella 601F05: 1 / 1 (100.0%)

Prevotella 701G08: 1 / 1 (100.0%)

Prevotella baroniae: 1 / 1 (100.0%)

Prevotella BR014: 1 / 1 (100.0%)

Prevotella BR014_2: 1 / 1 (100.0%)

Prevotella BR014_3: 0 / 1 (0.0%)

Prevotella BR014_4: 0 / 1 (0.0%)

Prevotella BS041: 1 / 1 (100.0%)

Prevotella buccae: 1 / 1 (100.0%)

Prevotella dentalis: 1 / 1 (100.0%)

Prevotella denticola: 1 / 1 (100.0%)

Prevotella denticola_2: 0 / 1 (0.0%)

Prevotella DO039: 1 / 1 (100.0%)

Prevotella E7 34: 1 / 1 (100.0%)

Prevotella enoeca: 1 / 1 (100.0%)

Prevotella fusca: 1 / 1 (100.0%)

Prevotella fusca_2: 0 / 1 (0.0%)

Prevotella FW035: 1 / 1 (100.0%)

Prevotella genomosp. P4: 1 / 1 (100.0%)

Prevotella histicola: 0 / 1 (0.0%)

Prevotella IK053: 1 / 1 (100.0%)

Prevotella IK062: 1 / 1 (100.0%)

Prevotella IK062_2: 1 / 1 (100.0%)

Prevotella intermedia: 1 / 1 (100.0%)

Prevotella intermedia_2: 0 / 1 (0.0%)

Prevotella intermedia_3: 0 / 1 (0.0%)

Prevotella loescheii: 1 / 1 (100.0%)

Prevotella loescheii_2: 1 / 1 (100.0%)

Prevotella loescheii_3: 1 / 1 (100.0%)

Prevotella maculosa: 1 / 1 (100.0%)

Prevotella maculosa_2: 1 / 1 (100.0%)

Prevotella maculosa_3: 1 / 1 (100.0%)

Prevotella marshii: 1 / 1 (100.0%)

Prevotella marshii_2: 0 / 1 (0.0%)

Prevotella melaninogenica: 1 / 1 (100.0%)

Prevotella melaninogenica_2: 1 / 1 (100.0%)

Prevotella melaninogenica_3: 0 / 1 (0.0%)

Prevotella micans: 1 / 1 (100.0%)

Prevotella multiformis: 1 / 1 (100.0%)

Prevotella multisaccharivorax: 1 / 1 (100.0%)

Prevotella ncd1310e09c1: 1 / 1 (100.0%)

Prevotella nigrescens: 1 / 1 (100.0%)

Prevotella nigrescens_2: 1 / 1 (100.0%)

Prevotella nigrescens_3: 1 / 1 (100.0%)

Prevotella nigrescens_4: 1 / 1 (100.0%)

Prevotella nigrescens_5: 1 / 1 (100.0%)

Prevotella oral taxon 292: 0 / 1 (0.0%)

Prevotella oral taxon 299: 1 / 1 (100.0%)

Prevotella oral taxon 300: 1 / 1 (100.0%)

Prevotella oral taxon 304: 1 / 1 (100.0%)

Prevotella oral taxon 306: 1 / 1 (100.0%)

Prevotella oral taxon 292_2: 0 / 1 (0.0%)

Prevotella oral taxon 292_3: 0 / 1 (0.0%)

Prevotella oral taxon 306_2: 0 / 1 (0.0%)

Prevotella oralis: 1 / 1 (100.0%)

Prevotella oralis_2: 1 / 1 (100.0%)

Prevotella oralis_3: 0 / 1 (0.0%)

Prevotella oris: 1 / 1 (100.0%)

Prevotella oris_2: 1 / 1 (100.0%)

Prevotella oris_3: 0 / 1 (0.0%)

Prevotella oulorum: 1 / 1 (100.0%)

Prevotella pallens: 1 / 1 (100.0%)

Prevotella pleuritidis: 1 / 1 (100.0%)

Prevotella pleuritidis_2: 0 / 1 (0.0%)

Prevotella saccharolytica: 1 / 1 (100.0%)

Prevotella saccharolytica_2: 1 / 1 (100.0%)

Prevotella saccharolytica_3: 0 / 1 (0.0%)

Prevotella salivae: 1 / 1 (100.0%)

Prevotella salivae_2: 1 / 1 (100.0%)

Prevotella salivae_3: 0 / 1 (0.0%)

Prevotella scopos: 1 / 1 (100.0%)

Prevotella tannerae: 1 / 1 (100.0%)

Prevotella tannerae_2: 1 / 1 (100.0%)

Prevotella tannerae_3: 1 / 1 (100.0%)

Prevotella tannerae_4: 1 / 1 (100.0%)

Prevotella tannerae_5: 1 / 1 (100.0%)

Prevotella tannerae_6: 0 / 1 (0.0%)

Prevotella tannerae_7: 0 / 1 (0.0%)

Prevotella timonensis: 1 / 1 (100.0%)

Prevotella veroralis: 1 / 1 (100.0%)

Prevotella veroralis_2: 0 / 1 (0.0%)

Prevotella veroralis_3: 0 / 1 (0.0%)

Prevotella veroralis_4: 0 / 1 (0.0%)

Prevotella YT053: 1 / 1 (100.0%)

unclassified Bacteroidales: 10 / 16 (62.5%)

unclassified Bacteroidales A: 4 / 5 (80.0%)

Bacteroidales DA064: 1 / 1 (100.0%)

Bacteroidales genomosp. P2: 1 / 1 (100.0%)

Bacteroidales MCE3 262: 1 / 1 (100.0%)

Bacteroidales MCE3 262_2: 1 / 1 (100.0%)

Bacteroidales MCE3 262_3: 0 / 1 (0.0%)

unclassified Bacteroidales B: 3 / 6 (50.0%)

Bacteroidales 3B5: 0 / 1 (0.0%)

Bacteroidales genomosp. P3: 1 / 1 (100.0%)

Bacteroidales oral taxon 511: 1 / 1 (100.0%)

Bacteroidales oral taxon 511_2: 1 / 1 (100.0%)

Bacteroidales oral taxon 511_3: 0 / 1 (0.0%)

Bacteroidales oral taxon 511_4: 0 / 1 (0.0%)

unclassified Bacteroidales C: 1 / 1 (100.0%)

Bacteroidales nbw731d05c1: 1 / 1 (100.0%)

unclassified Bacteroidales D: 0 / 1 (0.0%)

unclassified Bacteroidales E: 2 / 3 (66.7%)

Bacteroidales oral taxon 274: 1 / 1 (100.0%)

Bacteroidales oral taxon 274_2: 1 / 1 (100.0%)

Bacteroidales oral taxon 274_3: 0 / 1 (0.0%)

Flavobacteria: 36 / 47 (76.6%)

Flavobacteriales: 36 / 47 (76.6%)

Flavobacteriaceae: 36 / 47 (76.6%)

Bergeyella: 4 / 6 (66.7%)

Bergeyella 602D02: 1 / 1 (100.0%)

Bergeyella 602D02_2: 1 / 1 (100.0%)

Bergeyella 602D02_3: 0 / 1 (0.0%)

Bergeyella FJ976204: 1 / 1 (100.0%)

Bergeyella FJ976204_2: 0 / 1 (0.0%)

Bergeyella JF233961: 1 / 1 (100.0%)

Capnocytophaga: 29 / 38 (76.3%)

Capnocytophaga 503001: 1 / 1 (100.0%)

Capnocytophaga AM420030: 1 / 1 (100.0%)

Capnocytophaga ChDC OS44: 1 / 1 (100.0%)

Capnocytophaga DS022: 1 / 1 (100.0%)

Capnocytophaga FJ773364: 0 / 1 (0.0%)

Capnocytophaga gingivalis: 1 / 1 (100.0%)

Capnocytophaga gingivalis_2: 1 / 1 (100.0%)

Capnocytophaga gingivalis_3: 1 / 1 (100.0%)

Capnocytophaga gingivalis_4: 1 / 1 (100.0%)

Capnocytophaga gingivalis_5: 1 / 1 (100.0%)

Capnocytophaga gingivalis_6: 1 / 1 (100.0%)

Capnocytophaga gingivalis_7: 0 / 1 (0.0%)

Capnocytophaga gingivalis_8: 0 / 1 (0.0%)

Capnocytophaga granulosa: 1 / 1 (100.0%)

Capnocytophaga granulosa_2: 0 / 1 (0.0%)

Capnocytophaga leadbetteri: 1 / 1 (100.0%)

Capnocytophaga leadbetteri_2: 1 / 1 (100.0%)

Capnocytophaga leadbetteri_3: 1 / 1 (100.0%)

Capnocytophaga leadbetteri_4: 1 / 1 (100.0%)

Capnocytophaga novel_86369: 0 / 1 (0.0%)

Capnocytophaga ochracea: 1 / 1 (100.0%)

Capnocytophaga ochracea_2: 1 / 1 (100.0%)

Capnocytophaga ochracea_3: 1 / 1 (100.0%)

Capnocytophaga ochracea_4: 1 / 1 (100.0%)

Capnocytophaga ochracea_5: 1 / 1 (100.0%)

Capnocytophaga oral taxon B29: 1 / 1 (100.0%)

Capnocytophaga oral taxon B29_2: 0 / 1 (0.0%)

Capnocytophaga oral taxon H18: 0 / 1 (0.0%)

Capnocytophaga P4G_35 P4: 1 / 1 (100.0%)

Capnocytophaga P4G_35 P4_2: 1 / 1 (100.0%)

Capnocytophaga P4G_35 P4_3: 0 / 1 (0.0%)

Capnocytophaga sputigena: 1 / 1 (100.0%)

Capnocytophaga sputigena_2: 1 / 1 (100.0%)

Capnocytophaga sputigena_3: 1 / 1 (100.0%)

Capnocytophaga sputigena_4: 0 / 1 (0.0%)

Capnocytophaga U41352: 1 / 1 (100.0%)

Capnocytophaga X089: 1 / 1 (100.0%)

Capnocytophaga X089_2: 1 / 1 (100.0%)

Wautersiella: 3 / 3 (100.0%)

Wautersiella falsenii: 1 / 1 (100.0%)

Wautersiella falsenii_2: 1 / 1 (100.0%)

Wautersiella falsenii_3: 1 / 1 (100.0%)

Sphingobacteria: 1 / 2 (50.0%)

Sphingobacteriales: 1 / 2 (50.0%)

Sphingobacteriaceae: 1 / 2 (50.0%)

Sphingobacterium: 1 / 2 (50.0%)

Sphingobacterium multivorum: 1 / 1 (100.0%)

Sphingobacterium multivorum_2: 0 / 1 (0.0%)

BRC1: 1 / 1 (100.0%)

Phylum BRC1: 1 / 1 (100.0%)

Chlamydiae: 1 / 1 (100.0%)

Chlamydiales: 1 / 1 (100.0%)

Chlamydiaceae: 1 / 1 (100.0%)

Chlamydophila: 1 / 1 (100.0%)

Phylum Chlamydiae: 1 / 1 (100.0%)

Chlorobi: 1 / 1 (100.0%)

Chlorobia: 1 / 1 (100.0%)

Chlorobiales: 1 / 1 (100.0%)

Chlorobiaceae: 1 / 1 (100.0%)

Chloroherpeton: 1 / 1 (100.0%)

Phylum Chlorobi: 1 / 1 (100.0%)

Chloroflexi: 1 / 3 (33.3%)

Chloroflexi: 0 / 1 (0.0%)

Dehalococcoidetes: 0 / 1 (0.0%)

Thermomicrobia: 1 / 1 (100.0%)

Thermomicrobiales: 1 / 1 (100.0%)

Thermomicrobiaceae: 1 / 1 (100.0%)

Thermomicrobium: 1 / 1 (100.0%)

Phylum Thermomicrobia: 1 / 1 (100.0%)

Chrysiogenetes: 1 / 1 (100.0%)

Chrysiogenales: 1 / 1 (100.0%)

Chrysiogenaceae: 1 / 1 (100.0%)

Chrysiogenes: 1 / 1 (100.0%)

Phylum Chrysiogenetes: 1 / 1 (100.0%)

Cyanobacteria: 1 / 2 (50.0%)

Nostocales: 1 / 1 (100.0%)

Nostocaceae: 1 / 1 (100.0%)

Anabaena: 1 / 1 (100.0%)

Phylum Cyanobacteria: 1 / 1 (100.0%)

unclassified Cyanobacteria: 0 / 1 (0.0%)

Deinococcus-Thermus: 6 / 9 (66.7%)

Deinococci: 6 / 9 (66.7%)

ambiguous: 1 / 0

(Deinococcales/Deinococcus-Thermus): 1 / 0 (--%)

Deinococcales: 5 / 8 (62.5%)

Deinococcaceae: 5 / 8 (62.5%)

Deinococcus: 5 / 8 (62.5%)

Deinococcus aquiradiocola: 0 / 1 (0.0%)

Deinococcus CB003: 1 / 1 (100.0%)

Deinococcus MC04F03: 1 / 1 (100.0%)

Deinococcus Novel FX94ZIM01DNKYK: 0 / 1 (0.0%)

Deinococcus radiodurans: 1 / 1 (100.0%)

Deinococcus xinjiangensis: 1 / 1 (100.0%)

Deinococcus YJQ-47: 1 / 1 (100.0%)

Deinococcus YJQ-47_2: 0 / 1 (0.0%)

Deinococcus-Thermus: 0 / 1 (0.0%)

Dictyoglomi: 1 / 1 (100.0%)

Dictyoglomales: 1 / 1 (100.0%)

Dictyoglomaceae: 1 / 1 (100.0%)

Dictyogloums: 1 / 1 (100.0%)

Phylum Dictyoglomi: 1 / 1 (100.0%)

Fibrobacteres: 1 / 1 (100.0%)

Fibrobacterales: 1 / 1 (100.0%)

Fibrobacteraceae: 1 / 1 (100.0%)

Fibrobacter: 1 / 1 (100.0%)

Phylum Fibrobacteres: 1 / 1 (100.0%)

Firmicutes: 244 / 381 (64.0%)

Bacilli: 96 / 161 (59.6%)

Bacillales: 15 / 20 (75.0%)

Bacillaceae: 4 / 5 (80.0%)

Bacillus: 1 / 1 (100.0%)

Bacillus cereus: 1 / 1 (100.0%)

Exiguobacterium: 3 / 4 (75.0%)

ambiguous: 1 / 0

(Exiguobacterium aurantiacum mexicanum/Exiguobacterium profundum): 1 / 0 (--%)

Exiguobacterium aurantiacum mexicanum: 1 / 1 (100.0%)

Exiguobacterium aurantiacum mexicanum_2: 0 / 1 (0.0%)

Exiguobacterium oxidotolerans: 1 / 1 (100.0%)

Exiguobacterium profundum: 0 / 1 (0.0%)

Listeriaceae: 1 / 1 (100.0%)

Listeria: 1 / 1 (100.0%)

Listeria monocytogenes: 1 / 1 (100.0%)

Paenibacillaceae: 1 / 2 (50.0%)

Paenibacillus: 1 / 2 (50.0%)

Paenibacillus CA007: 1 / 1 (100.0%)

Paenibacillus CA007_2: 0 / 1 (0.0%)

Staphylococcaceae: 9 / 12 (75.0%)

Gemella: 4 / 7 (57.1%)

ambiguous: 1 / 0

(Gemella haemolysans/Gemella morbillorum/Gemella sanguinis): 1 / 0 (--%)

Gemella bergeriae: 1 / 1 (100.0%)

Gemella bergeriae_2: 1 / 1 (100.0%)

Gemella haemolysans: 0 / 1 (0.0%)

Gemella haemolysans_2: 0 / 1 (0.0%)

Gemella morbillorum: 1 / 1 (100.0%)

Gemella morbillorum_2: 0 / 1 (0.0%)

Gemella sanguinis: 0 / 1 (0.0%)

Staphylococcus: 5 / 5 (100.0%)

Staphylococcus aureus: 1 / 1 (100.0%)

Staphylococcus epidermidis: 1 / 1 (100.0%)

Staphylococcus hominis: 1 / 1 (100.0%)

Staphylococcus hominis_2: 1 / 1 (100.0%)

Staphylococcus warneri: 1 / 1 (100.0%)

Lactobacillales: 81 / 140 (57.9%)

Aerococcaceae: 3 / 7 (42.9%)

Abiotrophia: 2 / 6 (33.3%)

Abiotrophia defectiva: 1 / 1 (100.0%)

Abiotrophia defectiva_2: 1 / 1 (100.0%)

Abiotrophia defectiva_3: 0 / 1 (0.0%)

Abiotrophia defectiva_4: 0 / 1 (0.0%)

Abiotrophia defectiva_5: 0 / 1 (0.0%)

Abiotrophia defectiva_6: 0 / 1 (0.0%)

Aerococcus: 1 / 1 (100.0%)

Aerococcus urinaeequi: 1 / 1 (100.0%)

Carnobacteriaceae: 4 / 6 (66.7%)

Granulicatella: 4 / 6 (66.7%)

Granulicatella adiacens: 1 / 1 (100.0%)

Granulicatella adiacens_2: 1 / 1 (100.0%)

Granulicatella adiacens_3: 0 / 1 (0.0%)

Granulicatella adiacens_4: 0 / 1 (0.0%)

Granulicatella elegans: 1 / 1 (100.0%)

Granulicatella elegans_2: 1 / 1 (100.0%)

Enterococcaceae: 4 / 6 (66.7%)

Enterococcus: 4 / 6 (66.7%)

Enterococcus C100: 1 / 1 (100.0%)

Enterococcus C100_2: 0 / 1 (0.0%)

Enterococcus casseliflavus: 1 / 1 (100.0%)

Enterococcus faecalis: 1 / 1 (100.0%)

Enterococcus oral taxon A43: 1 / 1 (100.0%)

Enterococcus oral taxon A43_2: 0 / 1 (0.0%)

Lactobacillaceae: 19 / 27 (70.4%)

Lactobacillus: 19 / 27 (70.4%)

ambiguous: 1 / 0

(Lactobacillus AY959084/Lactobacillus iners): 1 / 0 (--%)

Lactobacillus AY959084: 0 / 1 (0.0%)

Lactobacillus AY959129: 1 / 1 (100.0%)

Lactobacillus casei rhamnosus: 1 / 1 (100.0%)

Lactobacillus casei rhamnosus_2: 1 / 1 (100.0%)

Lactobacillus casei rhamnosus_3: 0 / 1 (0.0%)

Lactobacillus crispatus: 1 / 1 (100.0%)

Lactobacillus delbrueckii: 1 / 1 (100.0%)

Lactobacillus fermentum: 1 / 1 (100.0%)

Lactobacillus fermentum_2: 1 / 1 (100.0%)

Lactobacillus fermentum_3: 1 / 1 (100.0%)

Lactobacillus frumenti: 1 / 1 (100.0%)

Lactobacillus frumenti_2: 0 / 1 (0.0%)

Lactobacillus gasseri: 1 / 1 (100.0%)

Lactobacillus gasseri_2: 1 / 1 (100.0%)

Lactobacillus gasseri_3: 0 / 1 (0.0%)

Lactobacillus gasseri_4: 0 / 1 (0.0%)

Lactobacillus iners: 0 / 1 (0.0%)

Lactobacillus jensenii: 1 / 1 (100.0%)

Lactobacillus oral taxon H25: 1 / 1 (100.0%)

Lactobacillus oral taxon H25_2: 0 / 1 (0.0%)

Lactobacillus oris: 1 / 1 (100.0%)

Lactobacillus plantarum: 0 / 1 (0.0%)

Lactobacillus salivarius: 1 / 1 (100.0%)

Lactobacillus salivarius_2: 1 / 1 (100.0%)

Lactobacillus ultunensis: 1 / 1 (100.0%)

Lactobacillus vaginalis: 1 / 1 (100.0%)

Lactobacillus vaginalis_2: 0 / 1 (0.0%)

Leuconostocaceae: 1 / 1 (100.0%)

Leuconostoc: 1 / 1 (100.0%)

Leuconostoc FF b03 2: 1 / 1 (100.0%)

Streptococcaceae: 50 / 93 (53.8%)

Lactococcus: 1 / 2 (50.0%)

Lactococcus lactis: 1 / 1 (100.0%)

Lactococcus lactis_2: 0 / 1 (0.0%)

Streptococcus: 49 / 91 (53.8%)

ambiguous: 8 / 0

(Streptococcus anginosus/Streptococcus intermedius constellatus): 1 / 0 (--%)

(Streptococcus australis/Streptococcus parasanguinis): 1 / 0 (--%)

(Streptococcus AY020/Streptococcus gordonii): 1 / 0 (--%)

(Streptococcus cristatus/Streptococcus oligofermentans sinensis): 1 / 0 (--%)

(Streptococcus FX003/Streptococcus mitis pneumoniae infantis oralis): 1 / 0 (--%)

(Streptococcus GM006/Streptococcus australis/Streptococcus parasanguinis): 1 / 0 (--%)

(Streptococcus mitis pneumoniae infantis oralis/Streptococcus strain GiTF): 1 / 0 (--%)

(Streptococcus oral taxon B66/Streptococcus sanguinis): 1 / 0 (--%)

Streptococcus agalactiae: 1 / 1 (100.0%)

Streptococcus anginosus: 1 / 1 (100.0%)

Streptococcus anginosus_2: 1 / 1 (100.0%)

Streptococcus anginosus_3: 0 / 1 (0.0%)

Streptococcus ASCB04: 0 / 1 (0.0%)

Streptococcus australis: 1 / 1 (100.0%)

Streptococcus australis_2: 0 / 1 (0.0%)

Streptococcus australis_3: 0 / 1 (0.0%)

Streptococcus australis_4: 0 / 1 (0.0%)

Streptococcus AY020: 0 / 1 (0.0%)

Streptococcus cristatus: 1 / 1 (100.0%)

Streptococcus cristatus_2: 0 / 1 (0.0%)

Streptococcus cristatus_3: 0 / 1 (0.0%)

Streptococcus cristatus_4: 0 / 1 (0.0%)

Streptococcus downei: 1 / 1 (100.0%)

Streptococcus E67Ca-231: 0 / 1 (0.0%)

Streptococcus ET G 4d04: 1 / 1 (100.0%)

Streptococcus FX003: 0 / 1 (0.0%)

Streptococcus GM006: 0 / 1 (0.0%)

Streptococcus gordonii: 1 / 1 (100.0%)

Streptococcus gordonii_2: 0 / 1 (0.0%)

Streptococcus gordonii_3: 0 / 1 (0.0%)

Streptococcus gordonii_4: 0 / 1 (0.0%)

Streptococcus gordonii_5: 0 / 1 (0.0%)

Streptococcus gordonii_6: 0 / 1 (0.0%)

Streptococcus intermedius constellatus: 1 / 1 (100.0%)

Streptococcus intermedius constellatus_2: 1 / 1 (100.0%)

Streptococcus intermedius constellatus_3: 0 / 1 (0.0%)

Streptococcus intermedius constellatus_4: 0 / 1 (0.0%)

Streptococcus lactarius: 1 / 1 (100.0%)

Streptococcus massiliensis: 1 / 1 (100.0%)

Streptococcus mitis pneumoniae infantis oralis: 1 / 1 (100.0%)

Streptococcus mitis pneumoniae infantis oralis_2: 1 / 1 (100.0%)

Streptococcus mitis pneumoniae infantis oralis_3: 1 / 1 (100.0%)

Streptococcus mitis pneumoniae infantis oralis_4: 1 / 1 (100.0%)

Streptococcus mitis pneumoniae infantis oralis_5: 1 / 1 (100.0%)

Streptococcus mitis pneumoniae infantis oralis_6: 1 / 1 (100.0%)

Streptococcus mitis pneumoniae infantis oralis_7: 1 / 1 (100.0%)

Streptococcus mitis pneumoniae infantis oralis_8: 1 / 1 (100.0%)

Streptococcus mitis pneumoniae infantis oralis_9: 1 / 1 (100.0%)

Streptococcus mitis pneumoniae infantis oralis_10: 1 / 1 (100.0%)

Streptococcus mitis pneumoniae infantis oralis_11: 1 / 1 (100.0%)

Streptococcus mitis pneumoniae infantis oralis_12: 0 / 1 (0.0%)

Streptococcus mitis pneumoniae infantis oralis_13: 0 / 1 (0.0%)

Streptococcus mitis pneumoniae infantis oralis_14: 0 / 1 (0.0%)

Streptococcus mitis pneumoniae infantis oralis_15: 0 / 1 (0.0%)

Streptococcus mitis pneumoniae infantis oralis_16: 0 / 1 (0.0%)

Streptococcus mitis pneumoniae infantis oralis_17: 0 / 1 (0.0%)

Streptococcus mitis pneumoniae infantis oralis_18: 0 / 1 (0.0%)

Streptococcus mitis pneumoniae infantis oralis_19: 0 / 1 (0.0%)

Streptococcus mitis pneumoniae infantis oralis_20: 0 / 1 (0.0%)

Streptococcus mitis pneumoniae infantis oralis_21: 0 / 1 (0.0%)

Streptococcus mitis pneumoniae infantis oralis_22: 0 / 1 (0.0%)

Streptococcus mitis pneumoniae infantis oralis_23: 0 / 1 (0.0%)

Streptococcus mitis pneumoniae infantis oralis_24: 0 / 1 (0.0%)

Streptococcus mitis pneumoniae infantis oralis_25: 0 / 1 (0.0%)

Streptococcus mutans: 1 / 1 (100.0%)

Streptococcus mutans_2: 1 / 1 (100.0%)

Streptococcus mutans_3: 1 / 1 (100.0%)

Streptococcus mutans_4: 0 / 1 (0.0%)

Streptococcus oligofermentans sinensis: 0 / 1 (0.0%)

Streptococcus oral taxon 066: 1 / 1 (100.0%)

Streptococcus oral taxon 066_2: 0 / 1 (0.0%)

Streptococcus oral taxon B66: 0 / 1 (0.0%)

Streptococcus oral taxon B66_2: 0 / 1 (0.0%)

Streptococcus parasanguinis: 1 / 1 (100.0%)

Streptococcus parasanguinis_2: 0 / 1 (0.0%)

Streptococcus parasanguinis_3: 0 / 1 (0.0%)

Streptococcus parasanguinis_4: 0 / 1 (0.0%)

Streptococcus parasanguinis_5: 0 / 1 (0.0%)

Streptococcus peroris: 1 / 1 (100.0%)

Streptococcus pyogenes: 1 / 1 (100.0%)

Streptococcus sanguinis: 1 / 1 (100.0%)

Streptococcus sanguinis_2: 1 / 1 (100.0%)

Streptococcus sanguinis_3: 1 / 1 (100.0%)

Streptococcus sanguinis_4: 0 / 1 (0.0%)

Streptococcus sanguinis_5: 0 / 1 (0.0%)

Streptococcus sanguinis_6: 0 / 1 (0.0%)

Streptococcus sanguinis_7: 0 / 1 (0.0%)

Streptococcus SK44: 1 / 1 (100.0%)

Streptococcus sobrinus: 1 / 1 (100.0%)

Streptococcus sobrinus_2: 1 / 1 (100.0%)

Streptococcus sobrinus_3: 1 / 1 (100.0%)

Streptococcus sobrinus_4: 0 / 1 (0.0%)

Streptococcus strain GiTF: 0 / 1 (0.0%)

Streptococcus vestibularis salivarius: 1 / 1 (100.0%)

Streptococcus vestibularis salivarius_2: 1 / 1 (100.0%)

Streptococcus vestibularis salivarius_3: 1 / 1 (100.0%)

Streptococcus vestibularis salivarius_4: 0 / 1 (0.0%)

Streptococcus VG051: 1 / 1 (100.0%)

Streptococcus VG051_2: 0 / 1 (0.0%)

unclassified Bacilli: 0 / 1 (0.0%)

Clostridia: 89 / 128 (69.5%)

Clostridiales: 89 / 128 (69.5%)

Clostridiaceae: 3 / 4 (75.0%)

Clostridium: 3 / 4 (75.0%)

Clostridium beijerinckii: 1 / 1 (100.0%)

Clostridium EU435418: 0 / 1 (0.0%)

Clostridium intestinale: 1 / 1 (100.0%)

Clostridium sticklandii: 1 / 1 (100.0%)

Clostridiales Family XI. Incertae Sedis: 10 / 22 (45.5%)

Parvimonas: 3 / 15 (20.0%)

ambiguous: 1 / 0

(Parvimonas P4P 31 P3/Parvimonas micra): 1 / 0 (--%)

Parvimonas micra: 1 / 1 (100.0%)

Parvimonas micra_2: 1 / 1 (100.0%)

Parvimonas micra_3: 0 / 1 (0.0%)

Parvimonas micra_4: 0 / 1 (0.0%)

Parvimonas micra_5: 0 / 1 (0.0%)

Parvimonas micra_6: 0 / 1 (0.0%)

Parvimonas micra_7: 0 / 1 (0.0%)

Parvimonas micra_8: 0 / 1 (0.0%)

Parvimonas micra_9: 0 / 1 (0.0%)

Parvimonas micra_10: 0 / 1 (0.0%)

Parvimonas micra_11: 0 / 1 (0.0%)

Parvimonas Novel FZGQPNQ01CFGLF: 0 / 1 (0.0%)

Parvimonas Novel FZIJQZN02G7LKN: 0 / 1 (0.0%)

Parvimonas Novel FZIJQZN02H4LA7: 0 / 1 (0.0%)

Parvimonas P4P 31 P3: 0 / 1 (0.0%)

Peptoniphilus: 7 / 7 (100.0%)

Peptoniphilus 10_5_D04: 1 / 1 (100.0%)

Peptoniphilus asaccharolyticus harei: 1 / 1 (100.0%)

Peptoniphilus EX153: 1 / 1 (100.0%)

Peptoniphilus lacrimalis: 1 / 1 (100.0%)

Peptoniphilus massiliensis: 1 / 1 (100.0%)

Peptoniphilus oral taxon 113: 1 / 1 (100.0%)

Peptoniphilus oral taxon 113_2: 1 / 1 (100.0%)

Eubacteriaceae: 15 / 17 (88.2%)

Eubacterium: 10 / 12 (83.3%)

Eubacterium brachy: 1 / 1 (100.0%)

Eubacterium brachy_2: 1 / 1 (100.0%)

Eubacterium minutum: 1 / 1 (100.0%)

Eubacterium nodatum: 1 / 1 (100.0%)

Eubacterium saphenum: 1 / 1 (100.0%)

Eubacterium sulci infirmum: 1 / 1 (100.0%)

Eubacterium sulci infirmum_2: 1 / 1 (100.0%)

Eubacterium yurii: 1 / 1 (100.0%)

Eubacterium yurii_2: 1 / 1 (100.0%)

Eubacterium yurii_3: 1 / 1 (100.0%)

Eubacterium yurii_4: 0 / 1 (0.0%)

Eubacterium yurii_5: 0 / 1 (0.0%)

Mogibacterium: 3 / 3 (100.0%)

Mogibacterium neglectum vescum: 1 / 1 (100.0%)

Mogibacterium neglectum vescum_2: 1 / 1 (100.0%)

Mogibacterium timidum: 1 / 1 (100.0%)

Pseudoramibacter: 1 / 1 (100.0%)

Pseudoramibacter alactolyticus: 1 / 1 (100.0%)

unclassified Peptostreptococcaceae: 1 / 1 (100.0%)

Eubacterium yurii: 1 / 1 (100.0%)

Lachnospiraceae: 40 / 52 (76.9%)

Catonella: 9 / 10 (90.0%)

Catonella AH153: 1 / 1 (100.0%)

Catonella BB124: 1 / 1 (100.0%)

Catonella BR063: 1 / 1 (100.0%)

Catonella FL037: 1 / 1 (100.0%)

Catonella GI038: 0 / 1 (0.0%)

Catonella GQ106843: 1 / 1 (100.0%)

Catonella morbi: 1 / 1 (100.0%)

Catonella morbi_2: 1 / 1 (100.0%)

Catonella morbi_3: 1 / 1 (100.0%)

Catonella morbi_4: 1 / 1 (100.0%)

Clostridium: 0 / 1 (0.0%)

Johnsonella: 2 / 2 (100.0%)

Johnsonella CK051: 1 / 1 (100.0%)

Johnsonella ignava: 1 / 1 (100.0%)

Johnsonella : 0 / 1 (0.0%)

Oribacterium: 6 / 7 (85.7%)

Oribacterium 303B10: 1 / 1 (100.0%)

Oribacterium AO068: 1 / 1 (100.0%)

Oribacterium MCE7 60 E1: 1 / 1 (100.0%)

Oribacterium sinus: 1 / 1 (100.0%)

Oribacterium sinus_2: 1 / 1 (100.0%)

Oribacterium sinus_3: 1 / 1 (100.0%)

Oribacterium sinus_4: 0 / 1 (0.0%)

Shuttleworthia: 5 / 5 (100.0%)

Shuttleworthia C1: 1 / 1 (100.0%)

Shuttleworthia C1_2: 1 / 1 (100.0%)

Shuttleworthia C1_3: 1 / 1 (100.0%)

Shuttleworthia MCE9 173: 1 / 1 (100.0%)

Shuttleworthia satelles: 1 / 1 (100.0%)

Uncultured Lachnospiraceae: 18 / 26 (69.2%)

Lachnospiraceae 502G12: 0 / 1 (0.0%)

Lachnospiraceae BS091: 1 / 1 (100.0%)

Lachnospiraceae BS091_2: 1 / 1 (100.0%)

Lachnospiraceae DO008: 1 / 1 (100.0%)

Lachnospiraceae IR009: 1 / 1 (100.0%)

Lachnospiraceae IR009_2: 1 / 1 (100.0%)

Lachnospiraceae IR009_3: 1 / 1 (100.0%)

Lachnospiraceae JI012: 1 / 1 (100.0%)

Lachnospiraceae JM048: 1 / 1 (100.0%)

Lachnospiraceae JM048_2: 1 / 1 (100.0%)

Lachnospiraceae MCE9 104 E2: 1 / 1 (100.0%)

Lachnospiraceae nbw231h06c1: 1 / 1 (100.0%)

Lachnospiraceae ncd998f08c1: 1 / 1 (100.0%)

Lachnospiraceae Novel FX94ZIM01CPXQV: 0 / 1 (0.0%)

Lachnospiraceae oral taxon 096: 1 / 1 (100.0%)

Lachnospiraceae oral taxon 100: 1 / 1 (100.0%)

Lachnospiraceae oral taxon 107: 1 / 1 (100.0%)

Lachnospiraceae oral taxon 100_2: 1 / 1 (100.0%)

Lachnospiraceae oral taxon 100_3: 0 / 1 (0.0%)

Lachnospiraceae oral taxon 100_4: 0 / 1 (0.0%)

Lachnospiraceae oral taxon 100_5: 0 / 1 (0.0%)

Lachnospiraceae oral taxon 107_2: 1 / 1 (100.0%)

Lachnospiraceae oral taxon A61: 0 / 1 (0.0%)

Lachnospiraceae oral taxon A61_2: 0 / 1 (0.0%)

Lachnospiraceae oral taxon G33: 0 / 1 (0.0%)

Lachnospiraceae RF118: 1 / 1 (100.0%)

Peptococcaceae: 6 / 10 (60.0%)

Desulfotomaculum: 1 / 2 (50.0%)

Desulfotomaculum SeaGull50: 1 / 1 (100.0%)

Desulfotomaculum SeaGull50_2: 0 / 1 (0.0%)

Peptococcus: 5 / 8 (62.5%)

Peptococcus BU014: 1 / 1 (100.0%)

Peptococcus Novel FZIJQZN02H3X64: 0 / 1 (0.0%)

Peptococcus Novel FZIJQZN02ISXBH: 0 / 1 (0.0%)

Peptococcus oral taxon 075: 1 / 1 (100.0%)

Peptococcus oral taxon 167: 1 / 1 (100.0%)

Peptococcus oral taxon 167_2: 1 / 1 (100.0%)

Peptococcus oral taxon 167_3: 1 / 1 (100.0%)

Peptococcus oral taxon 167_4: 0 / 1 (0.0%)

Peptostreptococcaceae: 5 / 8 (62.5%)

Filifactor: 1 / 4 (25.0%)

Filifactor alocis: 1 / 1 (100.0%)

Filifactor alocis_2: 0 / 1 (0.0%)

Filifactor alocis_3: 0 / 1 (0.0%)

Filifactor Novel GBNMMOK02G27C8: 0 / 1 (0.0%)

Peptostreptococcus: 1 / 1 (100.0%)

Peptostreptococcus stomatis: 1 / 1 (100.0%)

unclassified Peptostreptococcaceae: 3 / 3 (100.0%)

Peptostreptococcaceae ncd925f03c1: 1 / 1 (100.0%)

Peptostreptococcaceae oral taxon 081: 1 / 1 (100.0%)

Peptostreptococcaceae oral taxon 081_2: 1 / 1 (100.0%)

Syntrophomonadaceae: 1 / 1 (100.0%)

Syntrophomonas: 1 / 1 (100.0%)

Syntrophomonas P4PB 66: 1 / 1 (100.0%)

unclassified Clostridiales: 9 / 14 (64.3%)

unclassified Clostridiales: 8 / 13 (61.5%)

Clostridiales 303A04: 1 / 1 (100.0%)

Clostridiales CK047: 1 / 1 (100.0%)

Clostridiales FX028: 0 / 1 (0.0%)

Clostridiales FX033: 1 / 1 (100.0%)

Clostridiales JH012: 1 / 1 (100.0%)

Clostridiales JS001: 1 / 1 (100.0%)

Clostridiales MCE10 174: 1 / 1 (100.0%)

Clostridiales MCE7 107: 1 / 1 (100.0%)

Clostridiales Novel FZIJQZN02G3GP5: 0 / 1 (0.0%)

Clostridiales Novel FZIJQZN02IO9OA: 0 / 1 (0.0%)

Clostridiales oral taxon G74: 0 / 1 (0.0%)

Clostridiales oral taxon G74_2: 0 / 1 (0.0%)

Clostridiales P2PB 46 P3: 1 / 1 (100.0%)

unclassified Clostridiales B: 1 / 1 (100.0%)

Clostridiales oral taxon G74: 1 / 1 (100.0%)

Erysipelotrichi: 2 / 4 (50.0%)

Erysipelotrichales: 2 / 4 (50.0%)

Erysipelotrichaceae: 2 / 4 (50.0%)

Bulleidia: 1 / 1 (100.0%)

Bulleidia extructa: 1 / 1 (100.0%)

Erysipelothrix: 0 / 1 (0.0%)

Solobacterium: 1 / 2 (50.0%)

Solobacterium E31-11: 0 / 1 (0.0%)

Solobacterium moorei: 1 / 1 (100.0%)

Erysipelotrichia: 2 / 2 (100.0%)

Erysipelotrichales: 2 / 2 (100.0%)

Erysipelotrichaceae: 2 / 2 (100.0%)

Eggerthia: 2 / 2 (100.0%)

Eggerthia catenaformis: 1 / 1 (100.0%)

Eggerthia catenaformis_2: 1 / 1 (100.0%)

Negativicutes: 55 / 86 (64.0%)

Selenomonadales: 55 / 86 (64.0%)

Veillonellaceae: 55 / 86 (64.0%)

Anaeroglobus: 4 / 4 (100.0%)

Anaeroglobus BS073 CS025: 1 / 1 (100.0%)

Anaeroglobus BS073 CS025_2: 1 / 1 (100.0%)

Anaeroglobus geminatus: 1 / 1 (100.0%)

Anaeroglobus geminatus_2: 1 / 1 (100.0%)

Centipeda: 2 / 2 (100.0%)

Centipeda periodontii: 1 / 1 (100.0%)

Centipeda periodontii_2: 1 / 1 (100.0%)

Dialister: 6 / 7 (85.7%)

Dialister BS016: 1 / 1 (100.0%)

Dialister invisus: 1 / 1 (100.0%)

Dialister invisus_2: 1 / 1 (100.0%)

Dialister invisus_3: 1 / 1 (100.0%)

Dialister invisus_4: 0 / 1 (0.0%)

Dialister micraerophilus: 1 / 1 (100.0%)

Dialister pneumosintes: 1 / 1 (100.0%)

Megasphaera: 1 / 3 (33.3%)

Megasphaera micronuciformis: 1 / 1 (100.0%)

Megasphaera micronuciformis_2: 0 / 1 (0.0%)

Megasphaera micronuciformis_3: 0 / 1 (0.0%)

Mitsuokella: 2 / 3 (66.7%)

Mitsuokella oral taxon 131: 1 / 1 (100.0%)

Mitsuokella oral taxon 521: 1 / 1 (100.0%)

Mitsuokella oral taxon 131_2: 0 / 1 (0.0%)

Selenomonas: 26 / 45 (57.8%)

ambiguous: 3 / 0

(Selenomonas 102D03/Selenomonas noxia): 1 / 0 (--%)

(Selenomonas 201B03/Selenomonas AJ036/Selenomonas infelix): 1 / 0 (--%)

(Selenomonas GU413405/Selenomonas dianae): 1 / 0 (--%)

Selenomonas 403445: 0 / 1 (0.0%)

Selenomonas 102D03: 0 / 1 (0.0%)

Selenomonas 201B03: 0 / 1 (0.0%)

Selenomonas 403445_2: 0 / 1 (0.0%)

Selenomonas 502C12: 1 / 1 (100.0%)

Selenomonas AA024: 1 / 1 (100.0%)

Selenomonas AJ036: 0 / 1 (0.0%)

Selenomonas artemidis: 1 / 1 (100.0%)

Selenomonas artemidis_2: 1 / 1 (100.0%)

Selenomonas artemidis_3: 1 / 1 (100.0%)

Selenomonas CS024: 1 / 1 (100.0%)

Selenomonas dianae: 1 / 1 (100.0%)

Selenomonas dianae_2: 0 / 1 (0.0%)

Selenomonas dianae_3: 0 / 1 (0.0%)

Selenomonas DO042: 1 / 1 (100.0%)

Selenomonas DY027: 1 / 1 (100.0%)

Selenomonas DY027_2: 1 / 1 (100.0%)

Selenomonas EY047: 1 / 1 (100.0%)

Selenomonas flueggei: 1 / 1 (100.0%)

Selenomonas FT050: 1 / 1 (100.0%)

Selenomonas genomosp. P5: 1 / 1 (100.0%)

Selenomonas genomosp. P5_2: 0 / 1 (0.0%)

Selenomonas GU413405: 0 / 1 (0.0%)

Selenomonas GU413405_2: 0 / 1 (0.0%)

Selenomonas infelix: 1 / 1 (100.0%)

Selenomonas infelix_2: 1 / 1 (100.0%)

Selenomonas infelix_3: 1 / 1 (100.0%)

Selenomonas infelix_4: 0 / 1 (0.0%)

Selenomonas JI021: 1 / 1 (100.0%)

Selenomonas novel_125930: 0 / 1 (0.0%)

Selenomonas noxia: 0 / 1 (0.0%)

Selenomonas noxia_2: 0 / 1 (0.0%)

Selenomonas noxia_3: 0 / 1 (0.0%)

Selenomonas noxia_4: 0 / 1 (0.0%)

Selenomonas oral taxon 149: 1 / 1 (100.0%)

Selenomonas oral taxon 149_2: 0 / 1 (0.0%)

Selenomonas oral taxon E97: 0 / 1 (0.0%)

Selenomonas oral taxon H66: 0 / 1 (0.0%)

Selenomonas sputigena: 1 / 1 (100.0%)

Selenomonas sputigena_2: 1 / 1 (100.0%)

Selenomonas sputigena_3: 1 / 1 (100.0%)

Selenomonas sputigena_4: 1 / 1 (100.0%)

Selenomonas sputigena_5: 0 / 1 (0.0%)

Selenomonas sputigena_6: 0 / 1 (0.0%)

Shuttleworthia: 0 / 1 (0.0%)

Veillonella: 8 / 14 (57.1%)

Veillonella atypica dispar parvula: 1 / 1 (100.0%)

Veillonella atypica dispar parvula_2: 1 / 1 (100.0%)

Veillonella atypica dispar parvula_3: 1 / 1 (100.0%)

Veillonella atypica dispar parvula_4: 1 / 1 (100.0%)

Veillonella atypica dispar parvula_5: 1 / 1 (100.0%)

Veillonella atypica dispar parvula_6: 1 / 1 (100.0%)

Veillonella atypica dispar parvula_7: 0 / 1 (0.0%)

Veillonella atypica dispar parvula_8: 0 / 1 (0.0%)

Veillonella atypica dispar parvula_9: 0 / 1 (0.0%)

Veillonella atypica dispar parvula_10: 0 / 1 (0.0%)

Veillonella atypica dispar parvula_11: 0 / 1 (0.0%)

Veillonella atypica dispar parvula_12: 0 / 1 (0.0%)

Veillonella HB016: 1 / 1 (100.0%)

Veillonella HB016_2: 1 / 1 (100.0%)

Veillonellaceae: 6 / 8 (75.0%)

ambiguous: 1 / 0

(Veillonellaceae oral taxon 132 150/Veillonellaceae oral taxon 135 145 148 155): 1 / 0 (--%)

Veillonellaceae oral taxon 129: 1 / 1 (100.0%)

Veillonellaceae oral taxon 132 150: 0 / 1 (0.0%)

Veillonellaceae oral taxon 132 150_2: 0 / 1 (0.0%)

Veillonellaceae oral taxon 135 145 148 155: 1 / 1 (100.0%)

Veillonellaceae oral taxon 135 145 148 155_2: 1 / 1 (100.0%)

Veillonellaceae oral taxon 135 145 148 155_3: 1 / 1 (100.0%)

Veillonellaceae oral taxon 135 145 148 155_4: 1 / 1 (100.0%)

Veillonellaceae oral taxon 135 145 148 155_5: 0 / 1 (0.0%)

Fusobacteria: 16 / 67 (23.9%)

Fusobacteriales: 16 / 67 (23.9%)

Fusobacteriaceae: 16 / 67 (23.9%)

Fusobacterium: 16 / 31 (51.6%)

ambiguous: 2 / 0

(Fusobacterium nucleatum subsp. animalis/Fusobacterium nucleatum subsp. fusiforme): 1 / 0 (--%)

(Fusobacterium nucleatum subsp. fusiforme/Fusobacterium nucleatum subsp. nucleatum/Fusobacterium nucleatum subsp. polymorphum): 1 / 0 (--%)

Fusobacterium JF239554: 1 / 1 (100.0%)

Fusobacterium nbw727a02c1: 1 / 1 (100.0%)

Fusobacterium nucleatum subsp. animalis: 1 / 1 (100.0%)

Fusobacterium nucleatum subsp. animalis_2: 0 / 1 (0.0%)

Fusobacterium nucleatum subsp. animalis_3: 0 / 1 (0.0%)

Fusobacterium nucleatum subsp. animalis_4: 0 / 1 (0.0%)

Fusobacterium nucleatum subsp. fusiforme: 1 / 1 (100.0%)

Fusobacterium nucleatum subsp. fusiforme_2: 1 / 1 (100.0%)

Fusobacterium nucleatum subsp. fusiforme_3: 0 / 1 (0.0%)

Fusobacterium nucleatum subsp. fusiforme_4: 0 / 1 (0.0%)

Fusobacterium nucleatum subsp. fusiforme_5: 0 / 1 (0.0%)

Fusobacterium nucleatum subsp. fusiforme_6: 0 / 1 (0.0%)

Fusobacterium nucleatum subsp. fusiforme_7: 0 / 1 (0.0%)

Fusobacterium nucleatum subsp. nucleatum: 1 / 1 (100.0%)

Fusobacterium nucleatum subsp. nucleatum_2: 1 / 1 (100.0%)

Fusobacterium nucleatum subsp. nucleatum_3: 1 / 1 (100.0%)

Fusobacterium nucleatum subsp. nucleatum_4: 1 / 1 (100.0%)

Fusobacterium nucleatum subsp. nucleatum_5: 0 / 1 (0.0%)

Fusobacterium nucleatum subsp. nucleatum_6: 0 / 1 (0.0%)

Fusobacterium nucleatum subsp. nucleatum_7: 0 / 1 (0.0%)

Fusobacterium nucleatum subsp. nucleatum_8: 0 / 1 (0.0%)

Fusobacterium nucleatum subsp. nucleatum_9: 0 / 1 (0.0%)

Fusobacterium nucleatum subsp. polymorphum: 1 / 1 (100.0%)

Fusobacterium nucleatum subsp. polymorphum_2: 1 / 1 (100.0%)

Fusobacterium nucleatum subsp. polymorphum_3: 1 / 1 (100.0%)

Fusobacterium nucleatum subsp. polymorphum_4: 1 / 1 (100.0%)

Fusobacterium nucleatum subsp. polymorphum_5: 0 / 1 (0.0%)

Fusobacterium nucleatum subsp. polymorphum_6: 0 / 1 (0.0%)

Fusobacterium nucleatum subsp. polymorphum_7: 0 / 1 (0.0%)

Fusobacterium nucleatum subsp. polymorphum_8: 0 / 1 (0.0%)

Fusobacterium periodonticum: 1 / 1 (100.0%)

Leptotrichia: 0 / 36 (0.0%)

Gemmatimonadetes: 1 / 1 (100.0%)

Gemmatimonadales: 1 / 1 (100.0%)

Gemmatimonadaceae: 1 / 1 (100.0%)

Gemmatimonas: 1 / 1 (100.0%)

Phylum Gemmatimonadetes: 1 / 1 (100.0%)

Lentisphaerae: 0 / 1 (0.0%)

Nitrospira: 2 / 2 (100.0%)

Nitrospirales: 2 / 2 (100.0%)

Nitrospiraceae: 2 / 2 (100.0%)

Nitrospira: 1 / 1 (100.0%)

Phylum Nitrospira: 1 / 1 (100.0%)

Thermodesulfovibrio: 1 / 1 (100.0%)

Thermodesulfovibrio AB021304: 1 / 1 (100.0%)

OD1: 0 / 1 (0.0%)

OP10: 1 / 1 (100.0%)

Phylum OP10: 1 / 1 (100.0%)

OP11: 0 / 3 (0.0%)

Planctomycetes: 1 / 1 (100.0%)

Planctomycetacia: 1 / 1 (100.0%)

Planctomycetales: 1 / 1 (100.0%)

Planctomycetaceae: 1 / 1 (100.0%)

Pirellula: 1 / 1 (100.0%)

Phylum Planctomycetes: 1 / 1 (100.0%)

Proteobacteria: 143 / 228 (62.7%)

Alphaproteobacteria: 44 / 46 (95.7%)

Caulobacterales: 12 / 12 (100.0%)

Caulobacteraceae: 12 / 12 (100.0%)

Asticcacaulis: 1 / 1 (100.0%)

Asticcacaulis d41: 1 / 1 (100.0%)

Brevundimonas: 8 / 8 (100.0%)

Brevundimonas AB016610: 1 / 1 (100.0%)

Brevundimonas B12-22_GoMY: 1 / 1 (100.0%)

Brevundimonas DSSD81: 1 / 1 (100.0%)

Brevundimonas HINF004: 1 / 1 (100.0%)

Brevundimonas MS081A1 G01: 1 / 1 (100.0%)

Brevundimonas nbw914f05c1: 1 / 1 (100.0%)

Brevundimonas nbw914f05c1_2: 1 / 1 (100.0%)

Brevundimonas staleyi: 1 / 1 (100.0%)

Caulobacter: 3 / 3 (100.0%)

Caulobacter henricii: 1 / 1 (100.0%)

Caulobacter vibrioides: 1 / 1 (100.0%)

Caulobacter vibrioides_2: 1 / 1 (100.0%)

Rhizobiales: 9 / 10 (90.0%)

Methylobacteriaceae: 6 / 6 (100.0%)

Bosea: 1 / 1 (100.0%)

Bosea nbw521f07c1: 1 / 1 (100.0%)

Methylobacterium: 4 / 4 (100.0%)

Methylobacterium hispanicum: 1 / 1 (100.0%)

Methylobacterium jeotgali: 1 / 1 (100.0%)

Methylobacterium MD02H10: 1 / 1 (100.0%)

Methylobacterium strain F15: 1 / 1 (100.0%)

Mythylobacterium: 1 / 1 (100.0%)

Methylobacterium extorquens: 1 / 1 (100.0%)

Rhizobiaceae: 3 / 4 (75.0%)

Rhizobium: 3 / 4 (75.0%)

Rhizobium AKIW473: 1 / 1 (100.0%)

Rhizobium p03 D10: 1 / 1 (100.0%)

Rhizobium radiobacter: 1 / 1 (100.0%)

Rhizobium radiobacter_2: 0 / 1 (0.0%)

Rhizobiales : 1 / 1 (100.0%)

Xanthobacteraceae: 1 / 1 (100.0%)

Azorhizobium: 1 / 1 (100.0%)

Azorhizobium caulinodans: 1 / 1 (100.0%)

Rhodobacterales: 5 / 5 (100.0%)

Rhodobacteraceae: 5 / 5 (100.0%)

Paracoccus: 3 / 3 (100.0%)

Paracoccus marinus: 1 / 1 (100.0%)

Paracoccus nbw280e06c1: 1 / 1 (100.0%)

Paracoccus yeei: 1 / 1 (100.0%)

Rhodobacter: 2 / 2 (100.0%)

Rhodobacter RL185 aaj69a12: 1 / 1 (100.0%)

Rhodobacter sphaeroides: 1 / 1 (100.0%)

Rhodospirillales: 1 / 1 (100.0%)

Acetobacteraceae: 1 / 1 (100.0%)

Acetobacter: 1 / 1 (100.0%)

Acetobacter pasteurianus: 1 / 1 (100.0%)

Rhodovarius: 1 / 1 (100.0%)

Rhodovarius lipocyclicus: 1 / 1 (100.0%)

Sphingomonadales: 15 / 16 (93.8%)

Sphingomonadaceae: 15 / 16 (93.8%)

Novosphingobium: 5 / 6 (83.3%)

Novosphingobium capsulatum: 1 / 1 (100.0%)

Novosphingobium Cep1: 1 / 1 (100.0%)

Novosphingobium DR550SWSAEE43: 1 / 1 (100.0%)

Novosphingobium oral taxon 006: 0 / 1 (0.0%)

Novosphingobium panipatense: 1 / 1 (100.0%)

Novosphingobium resinovorum: 1 / 1 (100.0%)

Sphingobium: 1 / 1 (100.0%)

Sphingobium yanoikuyae: 1 / 1 (100.0%)

Sphingomonas: 9 / 9 (100.0%)

Sphingomonas azotifigens: 1 / 1 (100.0%)

Sphingomonas echinoides parapaucimobilis: 1 / 1 (100.0%)

Sphingomonas echinoides parapaucimobilis_2: 1 / 1 (100.0%)

Sphingomonas echinoides parapaucimobilis_3: 1 / 1 (100.0%)

Sphingomonas echinoides parapaucimobilis_4: 1 / 1 (100.0%)

Sphingomonas MN 122.2a: 1 / 1 (100.0%)

Sphingomonas nbw1120g06c1: 1 / 1 (100.0%)

Sphingomonas nbw625e08c1: 1 / 1 (100.0%)

Sphingomonas nbw99d07c1: 1 / 1 (100.0%)

Betaproteobacteria: 54 / 73 (74.0%)

Burkholderiales: 24 / 34 (70.6%)

Alcaligenaceae: 1 / 1 (100.0%)

Achromobacter: 1 / 1 (100.0%)

Achromobacter xylosoxidans: 1 / 1 (100.0%)

Burkholderiaceae: 7 / 9 (77.8%)

Burkholderia: 2 / 2 (100.0%)

Burkholderia cepacia: 1 / 1 (100.0%)

Burkholderia tropica: 1 / 1 (100.0%)

Lautropia: 2 / 4 (50.0%)

Lautropia mirabilis: 1 / 1 (100.0%)

Lautropia mirabilis_2: 1 / 1 (100.0%)

Lautropia mirabilis_3: 0 / 1 (0.0%)

Lautropia mirabilis_4: 0 / 1 (0.0%)

Ralstonia: 3 / 3 (100.0%)

Ralstonia insidiosa: 1 / 1 (100.0%)

Ralstonia oral taxon 027: 1 / 1 (100.0%)

Ralstonia oral taxon 027_2: 1 / 1 (100.0%)

Comamonadaceae: 12 / 15 (80.0%)

Acidovorax: 1 / 1 (100.0%)

Acidovorax catteyae: 1 / 1 (100.0%)

Comamonas: 5 / 6 (83.3%)

Comamonas BM-9_6: 1 / 1 (100.0%)

Comamonas BM-9_6_2: 0 / 1 (0.0%)

Comamonas denitrificans: 1 / 1 (100.0%)

Comamonas kerstersii: 1 / 1 (100.0%)

Comamonas koreensis: 1 / 1 (100.0%)

Comamonas testosteroni: 1 / 1 (100.0%)

Delftia: 1 / 1 (100.0%)

Delftia tsuruhatensis: 1 / 1 (100.0%)

Pelomonas: 2 / 2 (100.0%)

Pelomonas puraquae: 1 / 1 (100.0%)

Pelomonas puraquae_2: 1 / 1 (100.0%)

unclassified Comamonadaceae: 3 / 5 (60.0%)

Comamonadaceae 10B555: 1 / 1 (100.0%)

Comamonadaceae FX006: 1 / 1 (100.0%)

Comamonadaceae FX006_2: 0 / 1 (0.0%)

Comamonadaceae nbw502e06c1: 0 / 1 (0.0%)

Comamonadaceae VE3A04: 1 / 1 (100.0%)

Oxalobacteraceae: 1 / 4 (25.0%)

Herbaspirillum: 1 / 1 (100.0%)

Herbaspirillum frisingense: 1 / 1 (100.0%)

unclassified Oxalobacteraceae: 0 / 3 (0.0%)

unclassified Burkholderiales: 3 / 5 (60.0%)

Aquabacterium: 0 / 1 (0.0%)

Aquincola : 1 / 1 (100.0%)

Aquincola tertiaricarbonis: 1 / 1 (100.0%)

Roseateles: 1 / 1 (100.0%)

Roseateles aquatilis: 1 / 1 (100.0%)

Sphaerotilus: 1 / 1 (100.0%)

Sphaerotilus natans: 1 / 1 (100.0%)

unclassified Burkholderiales: 0 / 1 (0.0%)

Methylophilales: 2 / 2 (100.0%)

Methylophilaceae: 2 / 2 (100.0%)

Methylobacillus: 2 / 2 (100.0%)

Methylobacillus MC1_16S_38: 1 / 1 (100.0%)

Methylobacillus MCCrF11: 1 / 1 (100.0%)

Neisserales: 0 / 1 (0.0%)

Neisseriales: 25 / 33 (75.8%)

Neisseriaceae: 25 / 33 (75.8%)

Eikenella: 1 / 1 (100.0%)

Eikenella corrodens: 1 / 1 (100.0%)

Kingella: 8 / 8 (100.0%)

Kingella denitrificans: 1 / 1 (100.0%)

Kingella denitrificans_2: 1 / 1 (100.0%)

Kingella DQ003616: 1 / 1 (100.0%)

Kingella oral taxon 012: 1 / 1 (100.0%)

Kingella oral taxon 459: 1 / 1 (100.0%)

Kingella oral taxon 499: 1 / 1 (100.0%)

Kingella oralis: 1 / 1 (100.0%)

Kingella SG34: 1 / 1 (100.0%)

Neisseria: 15 / 22 (68.2%)

Neisseria AP085: 1 / 1 (100.0%)

Neisseria AP132: 0 / 1 (0.0%)

Neisseria bacilliformis: 1 / 1 (100.0%)

Neisseria bacilliformis_2: 1 / 1 (100.0%)

Neisseria bacilliformis_3: 0 / 1 (0.0%)

Neisseria Bol g69: 0 / 1 (0.0%)

Neisseria elongata: 1 / 1 (100.0%)

Neisseria FJ557362: 0 / 1 (0.0%)

Neisseria flava mucosa pharyngis: 1 / 1 (100.0%)

Neisseria flava mucosa pharyngis_2: 1 / 1 (100.0%)

Neisseria flava mucosa pharyngis_3: 1 / 1 (100.0%)

Neisseria flavescens: 1 / 1 (100.0%)

Neisseria GU431277: 0 / 1 (0.0%)

Neisseria GU431277_2: 0 / 1 (0.0%)

Neisseria JF220915: 1 / 1 (100.0%)

Neisseria lactamica: 1 / 1 (100.0%)

Neisseria meningitidis polysaccharea: 1 / 1 (100.0%)

Neisseria meningitidis polysaccharea_2: 1 / 1 (100.0%)

Neisseria meningitidis polysaccharea_3: 1 / 1 (100.0%)

Neisseria meningitidis polysaccharea_4: 1 / 1 (100.0%)

Neisseria meningitidis polysaccharea_5: 1 / 1 (100.0%)

Neisseria meningitidis polysaccharea_6: 0 / 1 (0.0%)

Simonsiella: 1 / 1 (100.0%)

Simonsiella ncd2672g08c1: 1 / 1 (100.0%)

unclassified Neisseriaceae: 0 / 1 (0.0%)

Rhizobiales: 2 / 2 (100.0%)

Methylobacteriaceae: 2 / 2 (100.0%)

Methylophilus: 2 / 2 (100.0%)

Methylophilus 1H 31: 1 / 1 (100.0%)

Methylophilus leisingeri: 1 / 1 (100.0%)

Rhodocyclales: 1 / 1 (100.0%)

Rhodocyclaceae: 1 / 1 (100.0%)

Propionivibrio: 1 / 1 (100.0%)

Propionivibrio HE018: 1 / 1 (100.0%)

Deltaproteobacteria: 3 / 4 (75.0%)

Desulfobacterales: 0 / 1 (0.0%)

Desulfovibrionales: 3 / 3 (100.0%)

Desulfomicrobiaceae: 1 / 1 (100.0%)

Desulfomicrobium: 1 / 1 (100.0%)

Desulfomicrobium orale: 1 / 1 (100.0%)

Desulfovibrionaceae: 2 / 2 (100.0%)

Desulfovibrio: 2 / 2 (100.0%)

Desulfovibrio fairfieldensis: 1 / 1 (100.0%)

Desulfovibrio fairfieldensis_2: 1 / 1 (100.0%)

Epsilonproteobacteria: 10 / 18 (55.6%)

Campylobacterales: 10 / 18 (55.6%)

Campylobacteraceae: 9 / 17 (52.9%)

Campylobacter: 9 / 17 (52.9%)

ambiguous: 1 / 0

(Campylobacter rectus/Campylobacter showae): 1 / 0 (--%)

Campylobacter BB120: 1 / 1 (100.0%)

Campylobacter concisus: 1 / 1 (100.0%)

Campylobacter concisus_2: 1 / 1 (100.0%)

Campylobacter concisus_3: 1 / 1 (100.0%)

Campylobacter curvus: 1 / 1 (100.0%)

Campylobacter curvus_2: 0 / 1 (0.0%)

Campylobacter gracilis: 1 / 1 (100.0%)

Campylobacter gracilis_2: 1 / 1 (100.0%)

Campylobacter gracilis_3: 0 / 1 (0.0%)

Campylobacter gracilis_4: 0 / 1 (0.0%)

Campylobacter HB035: 1 / 1 (100.0%)

Campylobacter Novel FZGQPNQ02FRUL4: 0 / 1 (0.0%)

Campylobacter oral taxon G43: 0 / 1 (0.0%)

Campylobacter rectus: 0 / 1 (0.0%)

Campylobacter rectus_2: 0 / 1 (0.0%)

Campylobacter rectus_3: 0 / 1 (0.0%)

Campylobacter showae: 0 / 1 (0.0%)

Helicobacteraceae: 1 / 1 (100.0%)

Helicobacter: 1 / 1 (100.0%)

Helicobacter pylori: 1 / 1 (100.0%)

Gammaproteobacteria: 32 / 87 (36.8%)

Aeromonadales: 1 / 1 (100.0%)

Aeromonadaceae: 1 / 1 (100.0%)

Aeromonas: 1 / 1 (100.0%)

Aeromonas VE39G03: 1 / 1 (100.0%)

Alteromonadales: 0 / 1 (0.0%)

Cardiobacteriales: 5 / 6 (83.3%)

Cardiobacteriaceae: 5 / 6 (83.3%)

Cardiobacterium: 5 / 6 (83.3%)

Cardiobacterium hominis: 1 / 1 (100.0%)

Cardiobacterium hominis_2: 1 / 1 (100.0%)

Cardiobacterium hominis_3: 1 / 1 (100.0%)

Cardiobacterium hominis_4: 1 / 1 (100.0%)

Cardiobacterium hominis_5: 0 / 1 (0.0%)

Cardiobacterium valvarum: 1 / 1 (100.0%)

Enterobacteriales: 0 / 10 (0.0%)

Pasteurellales: 0 / 26 (0.0%)

Pseudomonadales: 24 / 41 (58.5%)

Moraxellaceae: 17 / 34 (50.0%)

Acinetobacter: 11 / 25 (44.0%)

ambiguous: 2 / 0

(Acinetobacter baumanii/Acinetobacter junii): 1 / 0 (--%)

(Acinetobacter guillouiae/Acinetobacter gyllenbergii/Acinetobacter johnsonii): 1 / 0 (--%)

Acinetobacter baumanii: 0 / 1 (0.0%)

Acinetobacter calcoaceticus: 1 / 1 (100.0%)

Acinetobacter calcoaceticus_2: 0 / 1 (0.0%)

Acinetobacter calcoaceticus_3: 0 / 1 (0.0%)

Acinetobacter calcoaceticus_4: 0 / 1 (0.0%)

Acinetobacter guillouiae: 0 / 1 (0.0%)

Acinetobacter guillouiae_2: 0 / 1 (0.0%)

Acinetobacter gyllenbergii: 1 / 1 (100.0%)

Acinetobacter gyllenbergii_2: 0 / 1 (0.0%)

Acinetobacter JEL30: 1 / 1 (100.0%)

Acinetobacter johnsonii: 1 / 1 (100.0%)

Acinetobacter johnsonii_2: 0 / 1 (0.0%)

Acinetobacter johnsonii_3: 0 / 1 (0.0%)

Acinetobacter johnsonii_4: 0 / 1 (0.0%)

Acinetobacter johnsonii_5: 0 / 1 (0.0%)

Acinetobacter johnsonii_6: 0 / 1 (0.0%)

Acinetobacter junii: 1 / 1 (100.0%)

Acinetobacter junii_2: 0 / 1 (0.0%)

Acinetobacter junii_3: 0 / 1 (0.0%)

Acinetobacter junii_4: 0 / 1 (0.0%)

Acinetobacter lwoffii: 1 / 1 (100.0%)

Acinetobacter nbw231g07c1: 1 / 1 (100.0%)

Acinetobacter Pt_1_26: 0 / 1 (0.0%)

Acinetobacter soli: 1 / 1 (100.0%)

Acinetobacter ursingii: 1 / 1 (100.0%)

Moraxella: 5 / 8 (62.5%)

Moraxella caprae: 1 / 1 (100.0%)

Moraxella nonliqufaciens: 1 / 1 (100.0%)

Moraxella osloensis: 1 / 1 (100.0%)

Moraxella osloensis_2: 1 / 1 (100.0%)

Moraxella osloensis_3: 1 / 1 (100.0%)

Moraxella osloensis_4: 0 / 1 (0.0%)

Moraxella osloensis_5: 0 / 1 (0.0%)

Moraxella osloensis_6: 0 / 1 (0.0%)

Psychrobacter: 1 / 1 (100.0%)

Psychrobacter arenosus: 1 / 1 (100.0%)

Pseudomonadaceae: 7 / 7 (100.0%)

Azomonas: 1 / 1 (100.0%)

Azomonas agilis: 1 / 1 (100.0%)

Pseudomonas: 6 / 6 (100.0%)

Pseudomonas aeruginosa: 1 / 1 (100.0%)

Pseudomonas monteilii: 1 / 1 (100.0%)

Pseudomonas monteilii_2: 1 / 1 (100.0%)

Pseudomonas nbw505h03c1: 1 / 1 (100.0%)

Pseudomonas stutzeri: 1 / 1 (100.0%)

Pseudomonas synxantha: 1 / 1 (100.0%)

Xanthomonadales: 2 / 2 (100.0%)

Xanthomonadaceae: 2 / 2 (100.0%)

Stenotrophomonas: 1 / 1 (100.0%)

Stenotrophomonas rhizophila: 1 / 1 (100.0%)

Xanthomonas: 1 / 1 (100.0%)

Xanthomonas nbw424b01c1: 1 / 1 (100.0%)

Spirochaetes: 47 / 83 (56.6%)

Spirochaetales: 47 / 82 (57.3%)

Spirochaetaceae: 47 / 82 (57.3%)

Treponema: 47 / 82 (57.3%)

ambiguous: 1 / 0

(Treponema Novel GCV1N4H01EYZKL/Treponema denticola): 1 / 0 (--%)

Treponema 3:D:BQ032: 1 / 1 (100.0%)

Treponema 3:E:AT013: 1 / 1 (100.0%)

Treponema 3:G:BB003: 1 / 1 (100.0%)

Treponema amylovorum: 1 / 1 (100.0%)

Treponema amylovorum_2: 1 / 1 (100.0%)

Treponema Arg f118: 0 / 1 (0.0%)

Treponema BZ013: 1 / 1 (100.0%)

Treponema denticola: 0 / 1 (0.0%)

Treponema denticola_2: 0 / 1 (0.0%)

Treponema denticola_3: 0 / 1 (0.0%)

Treponema E D 05 72: 1 / 1 (100.0%)

Treponema E D 05 72_2: 0 / 1 (0.0%)

Treponema genomosp. P4: 1 / 1 (100.0%)

Treponema II:C:T1: 1 / 1 (100.0%)

Treponema II:C:T1_2: 0 / 1 (0.0%)

Treponema II:I:C53: 1 / 1 (100.0%)

Treponema II:I:C53_2: 0 / 1 (0.0%)

Treponema II:I:C53_3: 0 / 1 (0.0%)

Treponema III:A:D24: 1 / 1 (100.0%)

Treponema III:F:AT004: 1 / 1 (100.0%)

Treponema JU031: 1 / 1 (100.0%)

Treponema JU031_2: 1 / 1 (100.0%)

Treponema JU031_3: 1 / 1 (100.0%)

Treponema lecithinolyticum: 1 / 1 (100.0%)

Treponema maltophilum: 1 / 1 (100.0%)

Treponema maltophilum_2: 1 / 1 (100.0%)

Treponema maltophilum_3: 1 / 1 (100.0%)

Treponema Novel FX94ZIM01A3YUD: 0 / 1 (0.0%)

Treponema Novel FX94ZIM01AOT6O: 0 / 1 (0.0%)

Treponema Novel FX94ZIM01CNV0H: 0 / 1 (0.0%)

Treponema Novel FX94ZIM02F37Y0: 0 / 1 (0.0%)

Treponema Novel GCV1N4H01EYZKL: 0 / 1 (0.0%)

Treponema Novel GCV1N4H01EYZKL_2: 0 / 1 (0.0%)

Treponema oral taxon 230: 1 / 1 (100.0%)

Treponema oral taxon 258: 1 / 1 (100.0%)

Treponema oral taxon 263: 1 / 1 (100.0%)

Treponema oral taxon 508: 1 / 1 (100.0%)

Treponema oral taxon 517: 1 / 1 (100.0%)

Treponema oral taxon 230_2: 1 / 1 (100.0%)

Treponema oral taxon 230_3: 1 / 1 (100.0%)

Treponema oral taxon 230_4: 1 / 1 (100.0%)

Treponema oral taxon 230_5: 1 / 1 (100.0%)

Treponema oral taxon 230_6: 1 / 1 (100.0%)

Treponema oral taxon 230_7: 1 / 1 (100.0%)

Treponema oral taxon 258_2: 0 / 1 (0.0%)

Treponema oral taxon 258_3: 0 / 1 (0.0%)

Treponema oral taxon 258_4: 0 / 1 (0.0%)

Treponema oral taxon 263_2: 0 / 1 (0.0%)

Treponema oral taxon 508_2: 0 / 1 (0.0%)

Treponema oral taxon 517_2: 1 / 1 (100.0%)

Treponema oral taxon 517_3: 0 / 1 (0.0%)

Treponema oral taxon G41: 0 / 1 (0.0%)

Treponema oral taxon G53: 1 / 1 (100.0%)

Treponema oral taxon G41_2: 0 / 1 (0.0%)

Treponema oral taxon G53_2: 1 / 1 (100.0%)

Treponema oral taxon G53_3: 0 / 1 (0.0%)

Treponema parvum: 1 / 1 (100.0%)

Treponema pectinovorum: 1 / 1 (100.0%)

Treponema Phil g88: 1 / 1 (100.0%)

Treponema Phil g88_2: 0 / 1 (0.0%)

Treponema Phil_g6: 0 / 1 (0.0%)

Treponema socranskii subsp. buccale paredis socranskii: 1 / 1 (100.0%)

Treponema socranskii subsp. buccale paredis socranskii_2: 1 / 1 (100.0%)

Treponema socranskii subsp. buccale paredis socranskii_3: 1 / 1 (100.0%)

Treponema socranskii subsp. buccale paredis socranskii_4: 1 / 1 (100.0%)

Treponema socranskii subsp. buccale paredis socranskii_5: 0 / 1 (0.0%)

Treponema socranskii subsp. buccale paredis socranskii_6: 0 / 1 (0.0%)

Treponema vincentii medium: 1 / 1 (100.0%)

Treponema vincentii medium_2: 1 / 1 (100.0%)

Treponema vincentii medium_3: 1 / 1 (100.0%)

Treponema vincentii medium_4: 1 / 1 (100.0%)

Treponema vincentii medium_5: 1 / 1 (100.0%)

Treponema vincentii medium_6: 1 / 1 (100.0%)

Treponema vincentii medium_7: 0 / 1 (0.0%)

Treponema vincentii medium_8: 0 / 1 (0.0%)

Treponema vincentii medium_9: 0 / 1 (0.0%)

Treponema vincentii medium_10: 0 / 1 (0.0%)

Treponema vincentii medium_11: 0 / 1 (0.0%)

Treponema vincentii medium_12: 0 / 1 (0.0%)

Treponema vincentii medium_13: 0 / 1 (0.0%)

Treponema vincentii medium_14: 0 / 1 (0.0%)

Treponema vincentii medium_15: 0 / 1 (0.0%)

unclassified Spirochaetes: 0 / 1 (0.0%)

SR1: 0 / 5 (0.0%)

Synergistetes: 11 / 14 (78.6%)

Synergistia: 11 / 14 (78.6%)

Synergistales: 11 / 14 (78.6%)

Synergistaceae: 11 / 14 (78.6%)

Jonquetella: 1 / 1 (100.0%)

Jonquetella anthropi: 1 / 1 (100.0%)

Pyramidobacter: 1 / 1 (100.0%)

Pyramidobacter piscolens: 1 / 1 (100.0%)

Synergistes: 9 / 12 (75.0%)

Synergistes oral taxon 359: 1 / 1 (100.0%)

Synergistes oral taxon 361: 1 / 1 (100.0%)

Synergistes oral taxon 362: 1 / 1 (100.0%)

Synergistes oral taxon 363: 1 / 1 (100.0%)

Synergistes oral taxon 360 453: 1 / 1 (100.0%)

Synergistes oral taxon 360 453_2: 1 / 1 (100.0%)

Synergistes oral taxon 361_2: 1 / 1 (100.0%)

Synergistes oral taxon 362_2: 0 / 1 (0.0%)

Synergistes oral taxon 363_2: 1 / 1 (100.0%)

Synergistes oral taxon 363_3: 1 / 1 (100.0%)

Synergistes oral taxon 363_4: 0 / 1 (0.0%)

Synergistes oral taxon G36: 0 / 1 (0.0%)

Tenericutes: 4 / 6 (66.7%)

Mollicutes: 4 / 6 (66.7%)

Acholeplasmatales: 0 / 2 (0.0%)

Mycoplasmatales: 4 / 4 (100.0%)

Mycoplasmataceae: 4 / 4 (100.0%)

Mycoplasma: 4 / 4 (100.0%)

Mycoplasma faucium: 1 / 1 (100.0%)

Mycoplasma genomosp. P1 MB1 G23 16S: 1 / 1 (100.0%)

Mycoplasma salivarium: 1 / 1 (100.0%)

Phylum Tenericutes: 1 / 1 (100.0%)

Thermodesulfobacteria: 1 / 1 (100.0%)

Thermodesulfobacteriales: 1 / 1 (100.0%)

Thermodesulfobacteriaceae: 1 / 1 (100.0%)

Thermodesulfobacterium: 1 / 1 (100.0%)

Phylum Thermodesulfobacteria: 1 / 1 (100.0%)

Thermotogae: 0 / 1 (0.0%)

TM7: 20 / 28 (71.4%)

ambiguous: 1 / 0

(TM7 6BB802/TM7 nbw1037h06c1): 1 / 0 (--%)

TM7 401H12: 1 / 1 (100.0%)

TM7 6BB802: 1 / 1 (100.0%)

TM7 6BB802_2: 0 / 1 (0.0%)

TM7 7BB428: 1 / 1 (100.0%)

TM7 7BB428_2: 1 / 1 (100.0%)

TM7 B350-25: 1 / 1 (100.0%)

TM7 B350-25_2: 0 / 1 (0.0%)

TM7 EU670068: 1 / 1 (100.0%)

TM7 GL2-61: 1 / 1 (100.0%)

TM7 nbw1037h06c1: 0 / 1 (0.0%)

TM7 Novel GBNMMOK01C81NC: 1 / 1 (100.0%)

TM7 Novel GBNMMOK01C81NC_2: 0 / 1 (0.0%)

TM7 Novel GBNMMOK01CQHW4: 0 / 1 (0.0%)

TM7 oral taxon 347: 1 / 1 (100.0%)

TM7 oral taxon 348: 0 / 1 (0.0%)

TM7 oral taxon 349: 1 / 1 (100.0%)

TM7 oral taxon 350: 1 / 1 (100.0%)

TM7 oral taxon 351: 1 / 1 (100.0%)

TM7 oral taxon 352: 1 / 1 (100.0%)

TM7 oral taxon 355: 1 / 1 (100.0%)

TM7 oral taxon 437: 1 / 1 (100.0%)

TM7 oral taxon 488: 1 / 1 (100.0%)

TM7 oral taxon 348_2: 0 / 1 (0.0%)

TM7 oral taxon 349_2: 1 / 1 (100.0%)

TM7 oral taxon 349_3: 0 / 1 (0.0%)

TM7 oral taxon 351_2: 1 / 1 (100.0%)

TM7 oral taxon 351_3: 0 / 1 (0.0%)

TM7 UB12: 1 / 1 (100.0%)

Unclassified: 1 / 1 (100.0%)

Unclassified JE87: 1 / 1 (100.0%)

Unclassified Bacteria: 0 / 1 (0.0%)

Verrucomicrobia: 0 / 1 (0.0%)

WS3: 1 / 1 (100.0%)

Phylum WS3: 1 / 1 (100.0%)

Plot pie charts

You can click on a slice of the Root pie below. This will plot a new pie fot the selected group. You can supply a percentage threshold for the information included in the charts. This threshold is applied to the amplicon and the reference charts. For example, with a threshold of >2% the pie charts will only contain the taxa (e.g. Firmicutes) that occur more than 2% in your set relative to all taxa at their parent (e.g. Bacteria). Please note that changing this threshold does not change the pie charts: the new threshold is applied to new charts only. Thus, each chart can have a different threshold.

In the "amplicon sequences" charts below, you can plot all taxa or make a difference plot, which only includes taxa that were not targeted by your primers. The plot of differences (indicated with a pink header) may include all missing taxa or only taxa missing at least a certain percentage. This allows zooming into taxa of your interest. This percentage is relative (e.g. 30% means that 30% of sequences are missing from your set relative to the reference database).

Pie charts for amplicon sequences

Pie charts for reference database

[mousing over the pie shows the reference database count (e.g. 633/633), mousing over the legend shows the count in your set and the reference (e.g. 311/633)]

TaxMan Results

Overview for run on "CORE (20120209)"

Download amplicon and lineage data

Taxonomic tree with sequence-based counts

Plot pie charts

Pie charts for amplicon sequences

Pie charts for reference database