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DOMAINATION Results |
Domain lay out
The graph below show the domain organization of your query sequence. The first track shows your query sequence, the second track the domain organization summarized over all iterations, and the other tracks show domains found per iteration. If you mouse over a domain, domain coordinates will appear; if you click on a domain, the domain will be highlighted in the FASTA sequences of your query protein. An annotated graph is also available. For more info, please see the help.
Click on the tracks above to view the FASTA sequences and highlight the domains.
Sequences found by DOMAINATION
All domaination iterations found 1351 sequences.
This is 705 more than a normal PSI-BLAST run on your query found (646). You may download a FASTA file with all sequences found by DOMAINATION here.You have chosen to carry out a similarity search of your query against the FASTA database produced by this DOMAINATION run.
The BLASTP results are here (or in plain text).
The SSEARCH (Smith-Waterman) results are here (or in plain text).
Data download
The tables below show the results of your run. The first table contains the overall result, the count and all domain sequences. The second table shows the results of each iteration. The columns are:
Iter Iteration number Count Count of unique sequences Query Query used for iteration. Please note that the domains and alignments produced by DOMAINATION iteration iare the inputs for iterationi+1Alignment Download or view the domain alignments, used as PSI-BLAST support alignments, in Jalview BLAST report PSI-BLAST results Domain files Domain FASTA records
Overall result Count Domain files 1351 FASTA seqs
Results per iteration Iter Count Query Alignment BLAST report Domain files 1 646 Your query BLAST report FASTA seqs 2 606 It1_domain1 Get | BLAST report FASTA seqs 2 636 It1_domain2 Get | BLAST report 2 693 It1_domain3 Get | BLAST report 2 624 It1_domain4 Get | BLAST report 3 600 It2_domain1 Get | BLAST report FASTA seqs 3 628 It2_domain2 Get | BLAST report 4 604 It3_domain2 Get | BLAST report FASTA seqs 4 613 It3_domain3 Get | BLAST report 5 579 It4_domain1 Get | BLAST report FASTA seqs 5 630 It4_domain3 Get | BLAST report
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